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How KRA Recovers Taxes from Unexplained Deposits Even If You File Nil Returns

Daisy MoraabyDaisy Moraa
March 16, 2026
Reading Time: 4 mins read
How Kra Classifies Unexplained Deposits As Income

Former KRA's Commissioner General Humphrey Wattanga. PHOTO/KRA.

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In Kenya, filing nil returns does not automatically protect taxpayers from scrutiny. Under the law, the Kenya Revenue Authority (KRA) can monitor bank and mobile money inflows and classify unexplained deposits as taxable income if the source of the funds is not verifiable.

The authority operates under Section 3 of the Income Tax Act, which empowers it to presume that any unexplained funds constitute income.

This burden of proof lies with the taxpayer, who must provide credible documentation to show that deposits are non-taxable, such as loans, gifts, refunds, or money held on behalf of others.

How KRA Taxes Funds Despite Nil Income Returns

Tax and financial management trainer CPA Wachira Joseph noted that Tax Appeals Tribunal rulings reinforce this approach, confirming that KRA can lawfully recover taxes even when nil returns have been filed.

In his explanation, Wachira confirmed that if money flows into your bank accounts and you cannot explain the source, KRA may treat all deposits as income, and filing nil returns does not automatically protect you from this.

KRA will simply decide to treat any unexplained deposits as taxable income and assess tax, including penalties and interest, on those funds.

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“KRA will simply decide: – All deposits = income. – And tax those deposits,” Wachira noted.

He further advised that to safeguard against unexpected tax liabilities, maintain contracts, loan agreements, and reconciliations, properly document funds held for others, and engage a tax adviser to ensure records are defensible.

When Are Nil Returns Allowed to be Filed

According to the Kenya Revenue Authority, taxpayers can file nil returns if they have no taxable income during the year but still hold an active KRA PIN with an income tax obligation.

This commonly applies to students, unemployed individuals, or PIN holders with no employment, business, or rental income.


Also Read: KRA Reinstates Nil Return Filing for 2025 Cycle After Suspension: How to File


Nil returns are also permitted for dormant businesses that recorded no turnover during the reporting period.

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Even without financial activity, the authority requires PIN holders to file returns annually to remain compliant.

The authority indicated that nil return filing was temporarily suspended until May 1, 2026 for data validation.

During this period, KRA systems cross-check taxpayer information with banking records, Safaricom data, and eTIMS transactions.

The filing window will run from May 1 to June 30, 2026, for the 2025 income year, with a minimum penalty of KSh 2,000 for late submission.


Also Read: KRA Intensifies Crackdown on Tax Cheats Filing Nil Returns


Risks of Filing Nil Returns with Financial Activity

The Revenue Authority warns that filing nil returns while receiving income can trigger audits. Data mismatches between declared income and bank or mobile money records may lead to tax investigations.

Recent rulings by the Tax Appeals Tribunal have reinforced that unexplained deposits can be treated as taxable income.

This means taxpayers who file nil returns but have undocumented inflows risk tax assessments, penalties, and interest.

How Kra Identifies And Taxes Funds Despite Nil Income Returns
Kenya Revenue Authority staff. PHOTO/KRA
Tags: KRANil Returns
Daisy Moraa

Daisy Moraa

Daisy Moraa is an all-round journalist at The Kenya Times, covering education, business, politics, and health. She specializes in storytelling, news reporting, and content creation, with experience across both mainstream and digital media platforms. She actively champions for the Sustainable Development Goals (SDGs), focusing on mental health awareness and sustainability. She holds a Bachelor of Science in Communication and Journalism from Rongo University. She can be reached at [email protected].

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